2VUB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL enzyme
related structures by homologous chain: 1VUB, 4VUB
Gene
Ontology
ChainFunctionProcessComponent
G, C, A, H, F, E, B, D
  • DNA topoisomerase (ATP-hydro...


  • Primary referenceCrystal structure of CcdB, a topoisomerase poison from E. coli., Loris R, Dao-Thi MH, Bahassi EM, Van Melderen L, Poortmans F, Liddington R, Couturier M, Wyns L, J Mol Biol 1999 Jan 29;285(4):1667-77. PMID:9917404
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (2vub.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 2VUB
  • CSU: Contacts of Structural Units for 2VUB
  • Likely Quarternary Molecular Structure file(s) for 2VUB
  • Retrieve 2VUB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VUB from S2C, [Save to disk]
  • View 2VUB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vub] [2vub_A] [2vub_B] [2vub_C] [2vub_D] [2vub_E] [2vub_F] [2vub_G] [2vub_H]
  • SWISS-PROT database: [P62554]

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