2W2W Hydrolase date Nov 04, 2008
title Plcg2 Split Pleckstrin Homology (Ph) Domain
authors O.Opaleye, T.D.Bunney, S.M.Roe, L.H.Pearl
compound source
Molecule: 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodi Gamma-2;
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Fragment: Split Pleckstrin Homology (Spph), Residues 471-51 913;
Synonym: Phosphoinositide Phospholipase C, Phospholipase C- Plc-Gamma-2, Plc-Iv;
Ec: 3.1.4.11
Engineered: Yes
Mutation: Yes
Other_details: Two Sh2 Domains Excised From Sequence And Ch Together
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.303 R_Free 0.352
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.216 106.017 194.097 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand
enzyme Hydrolase E.C.3.1.4.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceStructural insights into formation of an active signaling complex between Rac and phospholipase C gamma 2., Bunney TD, Opaleye O, Roe SM, Vatter P, Baxendale RW, Walliser C, Everett KL, Josephs MB, Christow C, Rodrigues-Lima F, Gierschik P, Pearl LH, Katan M, Mol Cell. 2009 Apr 24;34(2):223-33. PMID:19394299
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk]
  • Biological Unit Coordinates (2w2w.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (2w2w.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb3.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb4.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb5.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb6.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb7.gz) 19 Kb
  • Biological Unit Coordinates (2w2w.pdb8.gz) 18 Kb
  • Biological Unit Coordinates (2w2w.pdb9.gz) 18 Kb
  • CSU: Contacts of Structural Units for 2W2W
  • Likely Quarternary Molecular Structure file(s) for 2W2W
  • Structure Factors (1505 Kb)
  • Retrieve 2W2W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W2W from S2C, [Save to disk]
  • Re-refined 2w2w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W2W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W2W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2W2W, from MSDmotif at EBI
  • Fold representative 2w2w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w2w_L] [2w2w_G] [2w2w_C] [2w2w_J] [2w2w_K] [2w2w_H] [2w2w_B] [2w2w_I] [2w2w_F] [2w2w_D] [2w2w_A] [2w2w] [2w2w_E]
  • SWISS-PROT database: [P16885]
  • Domain organization of [PLCG2_HUMAN] by SWISSPFAM
  • Domain found in 2W2W: [PH ] by SMART
  • Other resources with information on 2W2W
  • Community annotation for 2W2W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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