2WEA Hydrolase date Feb 03, 1998
title Acid Proteinase (Penicillopepsin) (E.C. Complex Wi Phosphonate Inhibitor: Methyl[Cyclo-7[(2r)-((N-Valyl) Amino (Hydroxyl-(1s)-1-Methyoxycarbonyl-2-Phenylethoxy) Phosphiny Ethyl]-1-Naphthaleneacetamide], Sodium Salt
authors J.Ding, M.E.Fraser, M.N.G.James
compound source
Molecule: Penicillopepsin
Chain: A
Organism_scientific: Penicillium Janthinellum
Organism_taxid: 5079
symmetry Space Group: C 1 2 1
R_factor 0.145 R_Free 0.190
length a length b length c angle alpha angle beta angle gamma
96.330 46.270 64.590 90.00 115.10 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand MAN, PP6, SO4 enzyme Hydrolase E.C. BRENDA
note 2WEA supersedes 1WEA
related structures by homologous chain: 1BXO, 1BXQ

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (2wea.pdb1.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 2WEA
  • CSU: Contacts of Structural Units for 2WEA
  • Likely Quarternary Molecular Structure file(s) for 2WEA
  • Retrieve 2WEA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WEA from S2C, [Save to disk]
  • View 2WEA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WEA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 2WEA from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WEA, from MSDmotif at EBI
  • Genome occurence of 2WEA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2wea__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 2wea from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wea_A] [2wea]
  • SWISS-PROT database: [P00798]
  • Domain organization of [PENP_PENJA] by SWISSPFAM
  • Other resources with information on 2WEA
  • Community annotation for 2WEA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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