2WVI	Transferase	date	Oct 16, 2009
title	Crystal Structure Of The N-Terminal Domain Of Bubr1
authors	S.D'Arcy, O.R.Davies, T.L.Blundell, V.M.Bolanos-Garcia
compound		source
Molecule: Mitotic Checkpoint Serinethreonine-Protein Kinase Bub1 Beta; Chain: A Fragment: N-Terminal Tpr Domain, Residues 57-220 Synonym: Mad3bub1-Related Protein Kinase, Hbubr1, Mitotic Checkpoint Kinase Mad3l, Protein Ssk1, Bubr1; Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Phat4
symmetry	Space Group: P 32 2 1	R_factor 0.22188 R_Free 0.25986
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.796 62.796 90.450 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	ACT, EDO, PR	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Defining the molecular basis of BubR1 kinetochore interactions and APC/C-CDC20 inhibition., D'Arcy S, Davies OR, Blundell TL, Bolanos-Garcia VM, J Biol Chem. 2010 May 7;285(19):14764-76. Epub 2010 Mar 10. PMID:20220147

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (2wvi.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 2WVI CSU: Contacts of Structural Units for 2WVI Structure Factors (236 Kb) Retrieve 2WVI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WVI from S2C, [Save to disk] Re-refined 2wvi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WVI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WVI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WVI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wvi_A] [2wvi] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2WVI: [Mad3_BUB1_I ] by SMART

Other resources with information on 2WVI

Community annotation for 2WVI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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