2YHO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACT, ZN	enzyme
note	2YHO is a representative structure
Gene Ontology	Chain Function Process Component B, D, H, F
Primary reference	The IDOL-UBE2D complex mediates sterol-dependent degradation of the LDL receptor., Zhang L, Fairall L, Goult BT, Calkin AC, Hong C, Millard CJ, Tontonoz P, Schwabe JW, Genes Dev. 2011 Jun 15;25(12):1262-74. PMID:21685362

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (2yho.pdb1.gz) 38 Kb Biological Unit Coordinates (2yho.pdb2.gz) 38 Kb Biological Unit Coordinates (2yho.pdb3.gz) 37 Kb Biological Unit Coordinates (2yho.pdb4.gz) 38 Kb LPC: Ligand-Protein Contacts for 2YHO CSU: Contacts of Structural Units for 2YHO Structure Factors (2944 Kb) Retrieve 2YHO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YHO from S2C, [Save to disk] Re-refined 2yho structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YHO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yho] [2yho_A] [2yho_B] [2yho_C] [2yho_D] [2yho_E] [2yho_F] [2yho_G] [2yho_H] SWISS-PROT database: Domains found in 2YHO: [RING] [UBCc ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---