3AFA		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, MN	enzyme
Gene Ontology	Chain Function Process Component A, E B, F C, G D, H
Primary reference	Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T., Tachiwana H, Kagawa W, Osakabe A, Kawaguchi K, Shiga T, Hayashi-Takanaka Y, Kimura H, Kurumizaka H, Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10454-9. Epub 2010 May 24. PMID:20498094

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (246 Kb) [Save to disk] Biological Unit Coordinates (3afa.pdb1.gz) 240 Kb LPC: Ligand-Protein Contacts for 3AFA CSU: Contacts of Structural Units for 3AFA Structure Factors (631 Kb) Retrieve 3AFA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AFA from S2C, [Save to disk] Re-refined 3afa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AFA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3afa] [3afa_A] [3afa_B] [3afa_C] [3afa_D] [3afa_E] [3afa_F] [3afa_G] [3afa_H] [3afa_I] [3afa_J] SWISS-PROT database: Domains found in 3AFA: [H2A] [H2B] [H3] [H4 ] by SMART

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