OCA Atlas for 3AOH

3AOH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MG, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, H, M
I, D, N
J, O, E
L, F, B, G, A, K
X, Y, Z

Primary reference

Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein., Tagami S, Sekine S, Kumarevel T, Hino N, Murayama Y, Kamegamori S, Yamamoto M, Sakamoto K, Yokoyama S, Nature. 2010 Dec 16;468(7326):978-82. Epub 2010 Dec 1. PMID:21124318

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1480 Kb) [Save to disk]

Biological Unit Coordinates (3aoh.pdb1.gz) 507 Kb

Biological Unit Coordinates (3aoh.pdb2.gz) 494 Kb

Biological Unit Coordinates (3aoh.pdb3.gz) 503 Kb

LPC: Ligand-Protein Contacts for 3AOH

CSU: Contacts of Structural Units for 3AOH

Structure Factors (1162 Kb)

Retrieve 3AOH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3AOH from S2C, [Save to disk]

Re-refined 3aoh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AOH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3aoh] [3aoh_A] [3aoh_B] [3aoh_C] [3aoh_D] [3aoh_E] [3aoh_F] [3aoh_G] [3aoh_H] [3aoh_I] [3aoh_J] [3aoh_K] [3aoh_L] [3aoh_M] [3aoh_N] [3aoh_O] [3aoh_P] [3aoh_Q] [3aoh_X] [3aoh_Y] [3aoh_Z]

SWISS-PROT database:

Domains found in 3AOH: [HhH1] [RNA_pol_Rpb6] [RPOLA_N] [RPOLD ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]