3AY4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, GAL, MAN, NAG enzyme
Primary referenceStructural basis for improved efficacy of therapeutic antibodies on defucosylation of their Fc glycans., Mizushima T, Yagi H, Takemoto E, Shibata-Koyama M, Isoda Y, Iida S, Masuda K, Satoh M, Kato K, Genes Cells. 2011 Nov;16(11):1071-1080. doi:, 10.1111/j.1365-2443.2011.01552.x. PMID:22023369
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (3ay4.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 3AY4
  • CSU: Contacts of Structural Units for 3AY4
  • Structure Factors (794 Kb)
  • Retrieve 3AY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AY4 from S2C, [Save to disk]
  • Re-refined 3ay4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3AY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ay4] [3ay4_A] [3ay4_B] [3ay4_C]
  • SWISS-PROT database:
  • Domains found in 3AY4: [IG] [IG_like] [IGc1 ] by SMART

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