3F9K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, ZN enzyme
note 3F9K is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
Y, M, p, h, d, E, s, l, Q, o, c, A, I, N, k, F, V, J, U, Z, t, B, g, R


Primary referenceA novel co-crystal structure affords the design of gain-of-function lentiviral integrase mutants in the presence of modified PSIP1/LEDGF/p75., Hare S, Shun MC, Gupta SS, Valkov E, Engelman A, Cherepanov P, PLoS Pathog. 2009 Jan;5(1):e1000259. Epub 2009 Jan 9. PMID:19132083
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (931 Kb) [Save to disk]
  • Biological Unit Coordinates (3f9k.pdb1.gz) 86 Kb
  • Biological Unit Coordinates (3f9k.pdb2.gz) 87 Kb
  • Biological Unit Coordinates (3f9k.pdb3.gz) 86 Kb
  • Biological Unit Coordinates (3f9k.pdb4.gz) 87 Kb
  • Biological Unit Coordinates (3f9k.pdb5.gz) 87 Kb
  • Biological Unit Coordinates (3f9k.pdb6.gz) 87 Kb
  • Biological Unit Coordinates (3f9k.pdb7.gz) 86 Kb
  • Biological Unit Coordinates (3f9k.pdb8.gz) 87 Kb
  • Biological Unit Coordinates (3f9k.pdb9.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 3F9K
  • CSU: Contacts of Structural Units for 3F9K
  • Likely Quarternary Molecular Structure file(s) for 3F9K
  • Structure Factors (1465 Kb)
  • Retrieve 3F9K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F9K from S2C, [Save to disk]
  • Re-refined 3f9k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3F9K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f9k] [3f9k_A] [3f9k_B] [3f9k_C] [3f9k_E] [3f9k_F] [3f9k_G] [3f9k_I] [3f9k_J] [3f9k_K] [3f9k_M] [3f9k_N] [3f9k_O] [3f9k_Q] [3f9k_R] [3f9k_S] [3f9k_U] [3f9k_V] [3f9k_W] [3f9k_Y] [3f9k_Z] [3f9k_a] [3f9k_c] [3f9k_d] [3f9k_e] [3f9k_g] [3f9k_h] [3f9k_i] [3f9k_k] [3f9k_l] [3f9k_m] [3f9k_o] [3f9k_p] [3f9k_q] [3f9k_s] [3f9k_t] [3f9k_u]
  • SWISS-PROT database: [P04584] [O75475]

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