3GOK Binding site mapping of protein ligands date
authors Scheich, C.
compound source
symmetry
R_factor
R_Free 0.25817
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.20
ligand P4O BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (590 Kb) [Save to disk]
  • Biological Unit Coordinates (3gok.pdb1.gz) 568 Kb
  • Biological Unit Coordinates (3gok.pdb2.gz) 148 Kb
  • Biological Unit Coordinates (3gok.pdb3.gz) 147 Kb
  • Biological Unit Coordinates (3gok.pdb4.gz) 148 Kb
  • Biological Unit Coordinates (3gok.pdb5.gz) 148 Kb
  • Biological Unit Coordinates (3gok.pdb6.gz) 54 Kb
  • Biological Unit Coordinates (3gok.pdb7.gz) 55 Kb
  • Biological Unit Coordinates (3gok.pdb8.gz) 54 Kb
  • Biological Unit Coordinates (3gok.pdb9.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 3GOK
  • CSU: Contacts of Structural Units for 3GOK
  • Structure Factors (1431 Kb)
  • Retrieve 3GOK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GOK from S2C, [Save to disk]
  • Re-refined 3gok structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GOK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3GOK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GOK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gok_I] [3gok_H] [3gok_L] [3gok] [3gok_J] [3gok_G] [3gok_K] [3gok_D] [3gok_A] [3gok_B] [3gok_E] [3gok_F] [3gok_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3GOK: [S_TKc ] by SMART
    • Other resources with information on 3GOK
  • Community annotation for 3GOK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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