3H8N	Immune System	date	Apr 29, 2009
title	Crystal Structure Analysis Of Kir2ds4
authors	T.Graef, D.A.Bushnell, P.Parham
compound		source
Molecule: Killer Cell Immunoglobulin-Like Receptor 2ds4 Chain: A Synonym: Mhc Class I Nk Cell Receptor, Natural Killer-Assoc Transcript 8, Nkat-8, P58 Natural Killer Cell Receptor Clon P58 Nk Receptor, Cl-17, Cd158 Antigen-Like Family Member I; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cd158i, Kir2ds4, Kir2ds40010101, Kka3, Nkat8 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Codonplus(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28c
symmetry	Space Group: P 21 21 21	R_factor 0.238 R_Free 0.284
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.232 62.851 65.934 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
Primary reference	KIR2DS4 is a product of gene conversion with KIR3DL2 that introduced specificity for HLA-A*11 while diminishing avidity for HLA-C., Graef T, Moesta AK, Norman PJ, Abi-Rached L, Vago L, Older Aguilar AM, Gleimer M, Hammond JA, Guethlein LA, Bushnell DA, Robinson PJ, Parham P, J Exp Med. 2009 Oct 26;206(11):2557-72. PMID:19858347

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (3h8n.pdb1.gz) 32 Kb CSU: Contacts of Structural Units for 3H8N Structure Factors (93 Kb) Retrieve 3H8N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3H8N from S2C, [Save to disk] Re-refined 3h8n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3H8N in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3H8N

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3H8N, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3h8n_A] [3h8n] SWISS-PROT database: [P43632] Domain organization of [KI2S4_HUMAN] by SWISSPFAM Domains found in 3H8N: [IG] [IG_like ] by SMART

Other resources with information on 3H8N

Community annotation for 3H8N at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---