3I8D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DFT, GOL	enzyme
Gene Ontology	Chain Function Process Component A, C
Primary reference	Pairing Geometry of the Hydrophobic Thymine Analogue 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray Crystallography., Pallan PS, Egli M, J Am Chem Soc. 2009 Aug 17. PMID:19685868

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (3i8d.pdb1.gz) 57 Kb Biological Unit Coordinates (3i8d.pdb2.gz) 58 Kb LPC: Ligand-Protein Contacts for 3I8D CSU: Contacts of Structural Units for 3I8D Structure Factors (746 Kb) Retrieve 3I8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3I8D from S2C, [Save to disk] Re-refined 3i8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3I8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3i8d] [3i8d_A] [3i8d_B] [3i8d_C] [3i8d_D] SWISS-PROT database: [Q9KEI9]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---