3IUG Splicing date Aug 31, 2009
title Crystal Structure Of The Rhogap Domain Of Rics
authors L.Nedyalkova, W.Tempel, Y.Tong, Y.Li, C.H.Arrowsmith, A.M.Edwards C.Bountra, J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium (Sgc)
compound source
Molecule: Rhocdc42rac Gtpase-Activating Protein Rics
Chain: A, B
Fragment: Rho-Gap Domain: Unp Residues 367-577
Synonym: P200rhogap, P250gap, Rhogap Involved In The Beta-C Cadherin And Nmda Receptor Signaling, Brain-Specific Rho Gt Activating Protein, Gab-Associated Cdc42rac Gtpase-Activat Protein, Gc-Gap, Gtpase Regulator Interacting With Trka;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gi:134105571, Grit, Kiaa0712, Rics
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-V2r-Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Mhl
symmetry Space Group: P 21 21 2
R_factor 0.199 R_Free 0.245
length a length b length c angle alpha angle beta angle gamma
102.264 117.369 37.717 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.77 Å
ligand UNX enzyme
A, B

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (3iug.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (3iug.pdb2.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 3IUG
  • CSU: Contacts of Structural Units for 3IUG
  • Structure Factors (592 Kb)
  • Retrieve 3IUG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IUG from S2C, [Save to disk]
  • Re-refined 3iug structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IUG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IUG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3IUG, from MSDmotif at EBI
  • Fold representative 3iug from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iug_A] [3iug] [3iug_B]
  • SWISS-PROT database: [A7KAX9]
  • Domain organization of [RICS_HUMAN] by SWISSPFAM
  • Domain found in 3IUG: [RhoGAP ] by SMART
  • Other resources with information on 3IUG
  • Community annotation for 3IUG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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