3KK7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EDO, MPD, MSE enzyme
Gene BT
Primary referenceStructure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron., Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Yeh A, Zhou J, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Oct 1;66(Pt, 10):1297-305. Epub 2010 Jul 31. PMID:20944225
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (3kk7.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (3kk7.pdb2.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 3KK7
  • CSU: Contacts of Structural Units for 3KK7
  • Structure Factors (7524 Kb)
  • Retrieve 3KK7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KK7 from S2C, [Save to disk]
  • Re-refined 3kk7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3KK7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kk7] [3kk7_A] [3kk7_B]
  • SWISS-PROT database: [Q8A267]
  • Belongs to the membrane attack complex/perforin (macpf) family according to TCDB.

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