3MWE Transferase date May 05, 2010
title Truncated Human Atp-Citrate Lyase With Tartrate Bound
authors M.E.Fraser, T.Sun
compound source
Molecule: Atp-Citrate Synthase
Chain: A
Fragment: Truncated Human Atp-Citrate Lyase (Unp Residues 1
Synonym: Atp-Citrate (Pro-S-)-Lyase, Citrate Cleavage Enzym
Ec: 2.3.3.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acly
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet42b+

Molecule: Atp-Citrate Synthase
Chain: B
Fragment: Truncated Human Atp-Citrate Lyase (Unp Residues 4
Synonym: Atp-Citrate (Pro-S-)-Lyase, Citrate Cleavage Enzym
Ec: 2.3.3.8
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acly
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet42b+
symmetry Space Group: C 1 2 1
R_factor 0.179 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.191 60.793 109.176 90.00 124.96 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand MG, TLA enzyme Transferase E.C.2.3.3.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceIdentification of the citrate-binding site of human ATP-citrate lyase using X-ray crystallography., Sun T, Hayakawa K, Bateman KS, Fraser ME, J Biol Chem. 2010 Aug 27;285(35):27418-28. Epub 2010 Jun 17. PMID:20558738
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (3mwe.pdb1.gz) 125 Kb
  • Biological Unit Coordinates (3mwe.pdb2.gz) 247 Kb
  • LPC: Ligand-Protein Contacts for 3MWE
  • CSU: Contacts of Structural Units for 3MWE
  • Structure Factors (350 Kb)
  • Retrieve 3MWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MWE from S2C, [Save to disk]
  • Re-refined 3mwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MWE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3MWE, from MSDmotif at EBI
  • Fold representative 3mwe from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mwe] [3mwe_A] [3mwe_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3MWE
  • Community annotation for 3MWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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