3OP3 Hydrolase date Aug 31, 2010
title Crystal Structure Of Cell Division Cycle 25c Protein Isoform Homo Sapiens
authors Y.Kim, A.Weger, C.Hatzos, P.Savitsky, C.Johansson, L.Ball, A.Barr, M.Vollmar, J.Muniz, J.Weigelt, C.H.Arrowsmith, A.Edwards, C.Boun O.Gileadi, F.Von Delft, S.Knapp, A.Joachimiak, Structural Genom Consortium (Sgc)
compound source
Molecule: M-Phase Inducer Phosphatase 3
Chain: A
Fragment: Unp Residues 270-462
Synonym: Dual Specificity Phosphatase Cdc25c
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdc25c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3-Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 31 2 1
R_factor 0.198 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.187 96.187 61.188 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.63 Å
ligand SO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3op3.pdb1.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 3OP3
  • CSU: Contacts of Structural Units for 3OP3
  • Structure Factors (72 Kb)
  • Retrieve 3OP3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OP3 from S2C, [Save to disk]
  • Re-refined 3op3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OP3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OP3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3OP3, from MSDmotif at EBI
  • Fold representative 3op3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3op3_A] [3op3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OP3: [RHOD ] by SMART
  • Other resources with information on 3OP3
  • Community annotation for 3OP3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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