3SQ8		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NEP	enzyme
Gene Ontology	Chain Function Process Component A, C, B, D
Primary reference	Analysis of the Active-Site Mechanism of Tyrosyl-DNA Phosphodiesterase I: A Member of the Phospholipase D Superfamily., Gajewski S, Comeaux EQ, Jafari N, Bharatham N, Bashford D, White SW, van Waardenburg RC, J Mol Biol. 2011 Dec 6. PMID:22155078

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (580 Kb) [Save to disk] Biological Unit Coordinates (3sq8.pdb1.gz) 146 Kb Biological Unit Coordinates (3sq8.pdb2.gz) 147 Kb Biological Unit Coordinates (3sq8.pdb3.gz) 147 Kb Biological Unit Coordinates (3sq8.pdb4.gz) 147 Kb Biological Unit Coordinates (3sq8.pdb5.gz) 289 Kb Biological Unit Coordinates (3sq8.pdb6.gz) 290 Kb LPC: Ligand-Protein Contacts for 3SQ8 CSU: Contacts of Structural Units for 3SQ8 Structure Factors (1468 Kb) Retrieve 3SQ8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SQ8 from S2C, [Save to disk] Re-refined 3sq8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SQ8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sq8] [3sq8_A] [3sq8_B] [3sq8_C] [3sq8_D] SWISS-PROT database:

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