3T5G	Signaling Protein,Lipid Binding Protein	date	Jul 27, 2011
title	Structure Of Fully Modified Farnesylated Rheb In Complex Wit
authors	S.A.Ismail, Y.X.Chen, A.Wittinghofer
compound		source
Molecule: Gtp-Binding Protein Rheb Chain: A Synonym: Ras Homolog Enriched In Brain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rheb, Rheb2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Retinal Rod Rhodopsin-Sensitive Cgmp 3',5'-Cyclic Phosphodiesterase Subunit Delta; Chain: B Synonym: Gmp-Pde Delta, Protein P17 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pde6d, Pded Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.890 57.380 134.520 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	CMT, FAR, GDP, MG	enzyme
Gene Ontology	Chain Function Process Component A B GTPase inhibitor activity
Primary reference	Arl2-GTP and Arl3-GTP regulate a GDI-like transport system for farnesylated cargo., Ismail SA, Chen YX, Rusinova A, Chandra A, Bierbaum M, Gremer L, Triola G, Waldmann H, Bastiaens PI, Wittinghofer A, Nat Chem Biol. 2011 Oct 16. doi: 10.1038/nchembio.686. PMID:22002721

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (3t5g.pdb1.gz) 60 Kb LPC: Ligand-Protein Contacts for 3T5G CSU: Contacts of Structural Units for 3T5G Structure Factors (289 Kb) Retrieve 3T5G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3T5G from S2C, [Save to disk] Re-refined 3t5g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3T5G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3T5G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3T5G, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3t5g_B] [3t5g] [3t5g_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3T5G: [RAS ] by SMART

Other resources with information on 3T5G

Community annotation for 3T5G at PDBWiki (http://pdbwiki.org)

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