3TD3		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GLY	enzyme
note	3TD3 is a representative structure
Gene Ontology	Chain Function Process Component B, H, G, F, C, A, E, D
Primary reference	Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane., Park JS, Lee WC, Yeo KJ, Ryu KS, Kumarasiri M, Hesek D, Lee M, Mobashery S, Song JH, Kim SI, Lee JC, Cheong C, Jeon YH, Kim HY, FASEB J. 2011 Sep 30. PMID:21965596

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk] Biological Unit Coordinates (3td3.pdb1.gz) 45 Kb Biological Unit Coordinates (3td3.pdb2.gz) 45 Kb Biological Unit Coordinates (3td3.pdb3.gz) 45 Kb Biological Unit Coordinates (3td3.pdb4.gz) 46 Kb LPC: Ligand-Protein Contacts for 3TD3 CSU: Contacts of Structural Units for 3TD3 Structure Factors (2086 Kb) Retrieve 3TD3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TD3 from S2C, [Save to disk] Re-refined 3td3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TD3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3td3] [3td3_A] [3td3_B] [3td3_C] [3td3_D] [3td3_E] [3td3_F] [3td3_G] [3td3_H] SWISS-PROT database:

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