3TXO Transferase Transferase Inhibitor date Sep 23, 2011
title Pkc Eta Kinase In Complex With A Naphthyridine
authors W.Stark, G.Rummel, S.W.Cowan-Jacob
compound source
Molecule: Protein Kinase C Eta Type
Chain: A
Fragment: Kinase Domain, Residues 333-683
Synonym: Pkc-L, Npkc-Eta
Ec: 2.7.11.13
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkch, Pkcl, Prkcl
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 2
R_factor 0.194 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.533 56.861 63.367 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand 07U, TPO BindingDB enzyme Transferase E.C.2.7.11.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference2,6-Naphthyridines as potent and selective inhibitors of the novel protein kinase C isozymes., van Eis MJ, Evenou JP, Floersheim P, Gaul C, Cowan-Jacob SW, Monovich L, Rummel G, Schuler W, Stark W, Strauss A, Matt A, Vangrevelinghe E, Wagner J, Soldermann N, Bioorg Med Chem Lett. 2011 Dec 15;21(24):7367-72. Epub 2011 Oct 21. PMID:22078216
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (3txo.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (3txo.pdb2.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 3TXO
  • CSU: Contacts of Structural Units for 3TXO
  • Structure Factors (375 Kb)
  • Retrieve 3TXO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TXO from S2C, [Save to disk]
  • Re-refined 3txo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TXO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TXO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3TXO, from MSDmotif at EBI
  • Fold representative 3txo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3txo_A] [3txo]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3TXO: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3TXO
  • Community annotation for 3TXO at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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