3UYS Transferase date Dec 06, 2011
title Crystal Structure Of Apo Human Ck1d
authors X.Huang
compound source
Molecule: Casein Kinase I Isoform Delta
Chain: A, B, C, D
Synonym: Cki-Delta, Ckid
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Csnk1d
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor 0.238 R_Free 0.276
length a length b length c angle alpha angle beta angle gamma
49.770 85.160 89.120 70.19 73.86 86.15
method X-Ray Diffractionresolution 2.30 Å
ligand SO4 enzyme Transferase E.C. BRENDA
A, D, C, B

Primary referenceStructural Basis for the Interaction between Casein Kinase 1 Delta and a Potent and Selective Inhibitor., Long A, Zhao H, Huang X, J Med Chem. 2012 Jan 5. PMID:22168824
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (3uys.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (3uys.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (3uys.pdb3.gz) 51 Kb
  • Biological Unit Coordinates (3uys.pdb4.gz) 51 Kb
  • Biological Unit Coordinates (3uys.pdb5.gz) 98 Kb
  • Biological Unit Coordinates (3uys.pdb6.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 3UYS
  • CSU: Contacts of Structural Units for 3UYS
  • Structure Factors (1481 Kb)
  • Retrieve 3UYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UYS from S2C, [Save to disk]
  • Re-refined 3uys structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UYS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UYS, from MSDmotif at EBI
  • Fold representative 3uys from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uys] [3uys_B] [3uys_A] [3uys_D] [3uys_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UYS: [STYKc ] by SMART
  • Other resources with information on 3UYS
  • Community annotation for 3UYS at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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