3UZD Protein Binding Hydrolase date Dec 07, 2011
title Crystal Structure Of 14-3-3 Gamma
authors C.Xu, C.Bian, F.Mackenzie, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, J.Min, Structural Genomics Consortium (Sgc)
compound source
Molecule: 14-3-3 Protein Gamma
Chain: A
Synonym: Protein Kinase C Inhibitor Protein 1, Kcip-1, 14-3 Gamma, N-Terminally Processed;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ywhag
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Histone Deacetylase 4
Chain: B
Synonym: Hd4
Ec: 3.5.1.98
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Polypeptide(L)
symmetry Space Group: I 2 2 2
R_factor 0.194 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.511 79.230 122.232 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.86 Å
ligand MG, NO3, SEP enzyme Hydrolase E.C.3.5.1.98 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein kinase C inhibitor a...
  • positive regulation of prote...

  • Primary referenceSequence-Specific Recognition of a PxLPxI/L Motif by an Ankyrin Repeat Tumbler Lock., Xu C, Jin J, Bian C, Lam R, Tian R, Weist R, You L, Nie J, Bochkarev A, Tempel W, Tan CS, Wasney GA, Vedadi M, Gish GD, Arrowsmith CH, Pawson T, Yang XJ, Min J, Sci Signal. 2012 May 29;5(226):ra39. PMID:22649097
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (3uzd.pdb1.gz) 313 Kb
  • Biological Unit Coordinates (3uzd.pdb2.gz) 157 Kb
  • Biological Unit Coordinates (3uzd.pdb3.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 3UZD
  • CSU: Contacts of Structural Units for 3UZD
  • Structure Factors (555 Kb)
  • Retrieve 3UZD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UZD from S2C, [Save to disk]
  • Re-refined 3uzd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UZD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UZD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UZD, from MSDmotif at EBI
  • Fold representative 3uzd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uzd_B] [3uzd] [3uzd_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UZD: [14_3_3 ] by SMART
  • Other resources with information on 3UZD
  • Community annotation for 3UZD at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science