3UZP Transferase Transferase Inhibitor date Dec 07, 2011
title Crystal Structure Of Ck1d With Pf670462 From P21 Crystal For
authors X.Huang
compound source
Molecule: Casein Kinase I Isoform Delta
Chain: A, B
Synonym: Cki-Delta, Ckid
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Csnk1d
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.222 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.000 72.800 88.990 90.00 103.21 90.00
method X-Ray Diffractionresolution 1.94 Å
ligand 0CK BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
note 3UZP is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis for the Interaction between Casein Kinase 1 Delta and a Potent and Selective Inhibitor., Long A, Zhao H, Huang X, J Med Chem. 2012 Jan 5. PMID:22168824
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (3uzp.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (3uzp.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (3uzp.pdb3.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 3UZP
  • CSU: Contacts of Structural Units for 3UZP
  • Structure Factors (1151 Kb)
  • Retrieve 3UZP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UZP from S2C, [Save to disk]
  • Re-refined 3uzp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UZP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UZP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UZP, from MSDmotif at EBI
  • Fold representative 3uzp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uzp_B] [3uzp_A] [3uzp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UZP: [STYKc ] by SMART
  • Other resources with information on 3UZP
  • Community annotation for 3UZP at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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