3VBB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, PO4	enzyme
Gene Ontology	Chain Function Process Component D, B, A, F, C, E
Primary reference	Unique domain appended to vertebrate tRNA synthetase is essential for vascular development., Xu X, Shi Y, Zhang HM, Swindell EC, Marshall AG, Guo M, Kishi S, Yang XL, Nat Commun. 2012 Feb 21;3:681. doi: 10.1038/ncomms1686. PMID:22353712

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk] Biological Unit Coordinates (3vbb.pdb1.gz) 149 Kb Biological Unit Coordinates (3vbb.pdb2.gz) 147 Kb Biological Unit Coordinates (3vbb.pdb3.gz) 144 Kb LPC: Ligand-Protein Contacts for 3VBB CSU: Contacts of Structural Units for 3VBB Structure Factors (1459 Kb) Retrieve 3VBB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VBB from S2C, [Save to disk] Re-refined 3vbb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VBB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vbb] [3vbb_A] [3vbb_B] [3vbb_C] [3vbb_D] [3vbb_E] [3vbb_F] SWISS-PROT database:

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