3VY7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MAN, SER enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis for Multiple Sugar Recognition of Jacalin-related Human ZG16p Lectin., Kanagawa M, Liu Y, Hanashima S, Ikeda A, Chai W, Nakano Y, Kojima-Aikawa K, Feizi T, Yamaguchi Y, J Biol Chem. 2014 Jun 13;289(24):16954-65. doi: 10.1074/jbc.M113.539114. Epub, 2014 Apr 30. PMID:24790092
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (3vy7.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 3VY7
  • CSU: Contacts of Structural Units for 3VY7
  • Structure Factors (56 Kb)
  • Retrieve 3VY7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VY7 from S2C, [Save to disk]
  • Re-refined 3vy7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VY7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vy7] [3vy7_A]
  • SWISS-PROT database:
  • Domain found in 3VY7: [Jacalin ] by SMART

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