3ZDE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity


  • Primary referenceThe structure of Escherichia coli ExoIX--implications for DNA binding and catalysis in flap endonucleases., Anstey-Gilbert CS, Hemsworth GR, Flemming CS, Hodskinson MR, Zhang J, Sedelnikova SE, Stillman TJ, Sayers JR, Artymiuk PJ, Nucleic Acids Res. 2013 Jul 2. PMID:23821668
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (3zde.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 3ZDE
  • Structure Factors (123 Kb)
  • Retrieve 3ZDE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZDE from S2C, [Save to disk]
  • Re-refined 3zde structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZDE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zde] [3zde_A]
  • SWISS-PROT database:
  • Domains found in 3ZDE: [53EXOc] [HhH1] [HhH2 ] by SMART

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