3ZOW Crystal Structure of Wild Type Nitrosomonas europaea Cytochrome c552 date
authors Hersleth, H.P., Can, M., Krucinska, J., Zoppellaro, G., Andersen, N.H., Karlsen, S., Wedekind, J.E., Andersson, K.K., Bren, K.L.
compound source
symmetry
R_factor
R_Free 0.25765
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.35
ligand HEC enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G
  • electron transfer activity


    • Primary referenceStructural Characterization of Nitrosomonas europaea Cytochrome c-552 Variants with Marked Differences in Electronic Structure., Can M, Krucinska J, Zoppellaro G, Andersen NH, Wedekind JE, Hersleth HP, Andersson KK, Bren KL, Chembiochem. 2013 Jul 31. doi: 10.1002/cbic.201300118. PMID:23908017
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (477 Kb) [Save to disk]
  • Biological Unit Coordinates (3zow.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb2.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb3.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb4.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb5.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb6.gz) 31 Kb
  • Biological Unit Coordinates (3zow.pdb7.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb8.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb9.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 3ZOW
  • CSU: Contacts of Structural Units for 3ZOW
  • Structure Factors (2724 Kb)
  • Retrieve 3ZOW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZOW from S2C, [Save to disk]
  • Re-refined 3zow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ZOW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ZOW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZOW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zow_B] [3zow_C] [3zow_G] [3zow_K] [3zow_L] [3zow_O] [3zow_P] [3zow_F] [3zow] [3zow_A] [3zow_J] [3zow_E] [3zow_N] [3zow_R] [3zow_D] [3zow_Q] [3zow_M] [3zow_H] [3zow_I]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3ZOW
  • Community annotation for 3ZOW at PDBWiki (http://pdbwiki.org)

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