3ZOW Electron Transport date Feb 25, 2013
title Crystal Structure Of Wild Type Nitrosomonas Europaea Cytochr
authors H.P.Hersleth, M.Can, J.Krucinska, G.Zoppellaro, N.H.Andersen, S. J.E.Wedekind, K.K.Andersson, K.L.Bren
compound source
Molecule: Cytochrome C-552
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R
Synonym: Cytochrome C-551, Cytochrome C552
Ec: 1.7.2.2
Organism_scientific: Nitrosomonas Europaea
Organism_taxid: 915
symmetry Space Group: P 21 21 21
R_factor 0.201 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.450 137.930 204.660 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand HEC enzyme Oxidoreductase E.C.1.7.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G
  • electron transfer activity


  • Primary referenceStructural Characterization of Nitrosomonas europaea Cytochrome c-552 Variants with Marked Differences in Electronic Structure., Can M, Krucinska J, Zoppellaro G, Andersen NH, Wedekind JE, Hersleth HP, Andersson KK, Bren KL, Chembiochem. 2013 Jul 31. doi: 10.1002/cbic.201300118. PMID:23908017
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (465 Kb) [Save to disk]
  • Biological Unit Coordinates (3zow.pdb1.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb2.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb3.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb4.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb5.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb6.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb7.gz) 30 Kb
  • Biological Unit Coordinates (3zow.pdb8.gz) 29 Kb
  • Biological Unit Coordinates (3zow.pdb9.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 3ZOW
  • CSU: Contacts of Structural Units for 3ZOW
  • Structure Factors (2724 Kb)
  • Retrieve 3ZOW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZOW from S2C, [Save to disk]
  • Re-refined 3zow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZOW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZOW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZOW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zow_B] [3zow_C] [3zow_G] [3zow_K] [3zow_L] [3zow_O] [3zow_P] [3zow_F] [3zow] [3zow_A] [3zow_J] [3zow_E] [3zow_N] [3zow_R] [3zow_D] [3zow_Q] [3zow_M] [3zow_H] [3zow_I]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ZOW
  • Community annotation for 3ZOW at PDBWiki (http://pdbwiki.org)

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