3GB6	Lyase	date	Feb 18, 2009
title	Structure Of Giardia Fructose-1,6-Biphosphate Aldolase D83a Complex With Fructose-1,6-Bisphosphate
authors	A.Galkin, O.Herzberg
compound		source
Molecule: Fructose-Bisphosphate Aldolase Chain: A, B Ec: 4.1.2.13 Engineered: Yes Mutation: Yes		Organism_scientific: Giardia Intestinalis Organism_taxid: 5741 Strain: Wb Gene: Ald, Fbpa Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet100d-Topo
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.500 67.180 172.180 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	P6F, ZN	enzyme	Lyase E.C.4.1.2.13 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Insights into the Substrate Binding and Stereoselectivity of Giardia Fructose-1,6-bisphosphate Aldolase (dagger) (,) (double dagger)., Galkin A, Li Z, Li L, Kulakova L, Pal LR, Dunaway-Mariano D, Herzberg O, Biochemistry. 2009 Mar 18. PMID:19236002

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk] Biological Unit Coordinates (3gb6.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 3GB6 CSU: Contacts of Structural Units for 3GB6 Likely Quarternary Molecular Structure file(s) for 3GB6 Structure Factors (294 Kb) Retrieve 3GB6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GB6 from S2C, [Save to disk] Re-refined 3gb6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GB6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GB6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GB6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gb6_B] [3gb6_A] [3gb6] SWISS-PROT database: [O97447] Domain organization of [O97447_GIALA] by SWISSPFAM

Other resources with information on 3GB6

Community annotation for 3GB6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---