4ASI Ligase date May 01, 2012
title Crystal Structure Of Human Acaca C-Terminal Domain
authors D.S.Froese, J.R.C.Muniz, W.Kiyani, T.Krojer, M.Vollmar, F.Von Del C.Bountra, C.H.Arrowsmith, A.Edwards, U.Oppermann, W.W.Yue
compound source
Molecule: Acetyl-Coa Carboxylase 1
Chain: A, B, C, D, E, F
Fragment: C-Terminal Domain, Residues 1493-2260
Synonym: Acc1, Acc-Alpha, Biotin Carboxylase, 6.3.4.14
Ec: 6.4.1.2, 6.3.4.14
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: R3-Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.966 143.712 540.072 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand
enzyme Ligase E.C.6.4.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1479 Kb) [Save to disk]
  • Biological Unit Coordinates (4asi.pdb1.gz) 509 Kb
  • Biological Unit Coordinates (4asi.pdb2.gz) 498 Kb
  • Biological Unit Coordinates (4asi.pdb3.gz) 478 Kb
  • CSU: Contacts of Structural Units for 4ASI
  • Structure Factors (1625 Kb)
  • Retrieve 4ASI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ASI from S2C, [Save to disk]
  • Re-refined 4asi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ASI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ASI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4ASI, from MSDmotif at EBI
  • Fold representative 4asi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4asi_B] [4asi_F] [4asi_A] [4asi_E] [4asi] [4asi_D] [4asi_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ASI
  • Community annotation for 4ASI at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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