4B5K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, HDD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, D, C
  • catalase activity
  • peroxidase activity


    • Primary referenceInvestigating the active centre of the Scytalidium thermophilum catalase., Yuzugullu Y, Trinh CH, Fairhurst L, Ogel ZB, McPherson MJ, Pearson AR, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Apr 1;69(Pt 4):369-75., doi: 10.1107/S1744309113004211. Epub 2013 Mar 28. PMID:23545640
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (483 Kb) [Save to disk]
  • Biological Unit Coordinates (4b5k.pdb1.gz) 474 Kb
  • LPC: Ligand-Protein Contacts for 4B5K
  • CSU: Contacts of Structural Units for 4B5K
  • Structure Factors (4455 Kb)
  • Retrieve 4B5K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B5K from S2C, [Save to disk]
  • Re-refined 4b5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4B5K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b5k] [4b5k_A] [4b5k_B] [4b5k_C] [4b5k_D]
  • SWISS-PROT database:
  • Domain found in 4B5K: [Catalase ] by SMART

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