4BDP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, SO4 enzyme
related structures by homologous chain: 1NK8, 2BDP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceVisualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal., Kiefer JR, Mao C, Braman JC, Beese LS, Nature 1998 Jan 15;391(6664):304-7. PMID:9440698
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (4bdp.pdb1.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 4BDP
  • CSU: Contacts of Structural Units for 4BDP
  • Likely Quarternary Molecular Structure file(s) for 4BDP
  • Structure Factors (725 Kb)
  • Retrieve 4BDP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BDP from S2C, [Save to disk]
  • Re-refined 4bdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BDP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bdp] [4bdp_A] [4bdp_P] [4bdp_T]
  • SWISS-PROT database: [P52026]
  • Domains found in 4BDP: [35EXOc] [POLAc ] by SMART

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