4CCM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, MN, OGA enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, C


Primary referenceRibosomal oxygenases are structurally conserved from prokaryotes to humans., Chowdhury R, Sekirnik R, Brissett NC, Krojer T, Ho CH, Ng SS, Clifton IJ, Ge W, Kershaw NJ, Fox GC, Muniz JR, Vollmar M, Phillips C, Pilka ES, Kavanagh KL, von Delft F, Oppermann U, McDonough MA, Doherty AJ, Schofield CJ, Nature. 2014 May 11. doi: 10.1038/nature13263. PMID:24814345
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (4ccm.pdb1.gz) 309 Kb
  • LPC: Ligand-Protein Contacts for 4CCM
  • CSU: Contacts of Structural Units for 4CCM
  • Structure Factors (2312 Kb)
  • Retrieve 4CCM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CCM from S2C, [Save to disk]
  • Re-refined 4ccm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CCM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ccm] [4ccm_A] [4ccm_B] [4ccm_C] [4ccm_D]
  • SWISS-PROT database:
  • Domain found in 4CCM: [JmjC ] by SMART

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