4EHZ	The Jak1 kinase domain in complex with inhibitor	date	2012-04-04
authors	Lupardus, P.J., Steffek, M.
compound		source
symmetry		R_factor R_Free 0.2287
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.17
ligand	EDO, JAK, PTR BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Discovery and Optimization of C-2 Methyl Imidazopyrrolopyridines as Potent and Orally Bioavailable JAK1 Inhibitors with Selectivity over JAK2., Zak M, Mendonca R, Balazs M, Barrett K, Bergeron P, Blair WS, Chang C, Deshmukh G, Devoss J, Dragovich PS, Eigenbrot C, Ghilardi N, Gibbons P, Gradl S, Hamman C, Hanan EJ, Harstad E, Hewitt PR, Hurley CA, Jin T, Johnson A, Johnson T, Kenny JR, Koehler MF, Bir Kohli P, Kulagowski JJ, Labadie S, Liao J, Liimatta M, Lin Z, Lupardus PJ, Maxey RJ, Murray JM, Pulk R, Rodriguez M, Savage S, Shia S, Steffek M, Ubhayakar S, Ultsch M, van Abbema A, Ward SI, Xiao L, Xiao Y, J Med Chem. 2012 Jun 28. PMID:22698084

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (393 Kb) [Save to disk] Biological Unit Coordinates (4ehz.pdb1.gz) 101 Kb Biological Unit Coordinates (4ehz.pdb2.gz) 98 Kb Biological Unit Coordinates (4ehz.pdb3.gz) 100 Kb Biological Unit Coordinates (4ehz.pdb4.gz) 98 Kb LPC: Ligand-Protein Contacts for 4EHZ CSU: Contacts of Structural Units for 4EHZ Structure Factors (765 Kb) Retrieve 4EHZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4EHZ from S2C, [Save to disk] Re-refined 4ehz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4EHZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4EHZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4EHZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ehz_B] [4ehz] [4ehz_A] [4ehz_D] [4ehz_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4EHZ: [TyrKc ] by SMART

Other resources with information on 4EHZ

Community annotation for 4EHZ at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---