4EUT Transferase Transferase Inhibitor date Apr 25, 2012
title Structure Of Bx-795 Complexed With Unphosphorylated Human Tb Uld Domain
authors X.Ma, E.Helgason, Q.T.Phung, C.L.Quan, R.S.Iyer, M.W.Lee, K.K.Bowm M.A.Starovasnik, E.C.Dueber
compound source
Molecule: Serinethreonine-Protein Kinase Tbk1
Chain: A, B
Fragment: Kinase-Uld Domain, Unp Residues 2-385
Synonym: Nf-Kappa-B-Activating Kinase, T2k, Tank-Binding Ki
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tbk1, Nak
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.214 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.915 60.214 116.716 90.00 94.05 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand BX7, IOD, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis of Tank-binding kinase 1 activation by transautophosphorylation., Ma X, Helgason E, Phung QT, Quan CL, Iyer RS, Lee MW, Bowman KK, Starovasnik MA, Dueber EC, Proc Natl Acad Sci U S A. 2012 Jun 12;109(24):9378-83. Epub 2012 May 22. PMID:22619329
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk]
  • Biological Unit Coordinates (4eut.pdb1.gz) 264 Kb
  • LPC: Ligand-Protein Contacts for 4EUT
  • CSU: Contacts of Structural Units for 4EUT
  • Structure Factors (453 Kb)
  • Retrieve 4EUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EUT from S2C, [Save to disk]
  • Re-refined 4eut structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EUT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4EUT, from MSDmotif at EBI
  • Fold representative 4eut from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4eut] [4eut_B] [4eut_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EUT: [STYKc ] by SMART
  • Other resources with information on 4EUT
  • Community annotation for 4EUT at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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