4EUU Transferase Transferase Inhibitor date Apr 25, 2012
title Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172
authors X.Ma, E.Helgason, Q.T.Phung, C.L.Quan, R.S.Iyer, M.W.Lee, K.K.Bowm M.A.Starovasnik, E.C.Dueber
compound source
Molecule: Serinethreonine-Protein Kinase Tbk1
Chain: A, B
Fragment: Kinase Domain, Unp Residues 2-308
Synonym: Nf-Kappa-B-Activating Kinase, T2k, Tank-Binding Ki
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tbk1, Nak
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 31
R_factor 0.169 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.095 76.095 130.945 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand BX7, GOL, IOD, SEP, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis of Tank-binding kinase 1 activation by transautophosphorylation., Ma X, Helgason E, Phung QT, Quan CL, Iyer RS, Lee MW, Bowman KK, Starovasnik MA, Dueber EC, Proc Natl Acad Sci U S A. 2012 Jun 12;109(24):9378-83. Epub 2012 May 22. PMID:22619329
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (4euu.pdb1.gz) 230 Kb
  • LPC: Ligand-Protein Contacts for 4EUU
  • CSU: Contacts of Structural Units for 4EUU
  • Structure Factors (974 Kb)
  • Retrieve 4EUU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EUU from S2C, [Save to disk]
  • Re-refined 4euu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EUU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EUU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4EUU, from MSDmotif at EBI
  • Fold representative 4euu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4euu_A] [4euu_B] [4euu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EUU: [STYKc ] by SMART
  • Other resources with information on 4EUU
  • Community annotation for 4EUU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science