4FH0 Immune System date Jun 05, 2012
title Crystal Structure Of Human Bincard Card, Double Mutant F16m Form
authors K.E.Chen, B.Kobe, J.L.Martin
compound source
Molecule: Bcl10-Interacting Card Protein
Chain: A, B
Fragment: Caspase Recruitment Domain
Synonym: Bincard
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C9orf89
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 1
R_factor 0.137 R_Free 0.177
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.196 36.669 43.276 108.54 90.30 111.01
method X-Ray Diffractionresolution 1.40 Å
ligand MSE, SO4 enzyme
Primary referenceThe structure of the caspase recruitment domain of BinCARD reveals that all three cysteines can be oxidized., Chen KE, Richards AA, Caradoc-Davies TT, Vajjhala PR, Robin G, Lua LH, Hill JM, Schroder K, Sweet MJ, Kellie S, Kobe B, Martin J, Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):774-84. doi:, 10.1107/S0907444913001558. Epub 2013 Apr 11. PMID:23633586
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (4fh0.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (4fh0.pdb2.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4FH0
  • CSU: Contacts of Structural Units for 4FH0
  • Structure Factors (448 Kb)
  • Retrieve 4FH0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FH0 from S2C, [Save to disk]
  • Re-refined 4fh0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FH0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FH0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4FH0, from MSDmotif at EBI
  • Fold representative 4fh0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fh0] [4fh0_B] [4fh0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4FH0
  • Community annotation for 4FH0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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