4GVF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MES, NAG, NDG	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Active Site Plasticity within the Glycoside Hydrolase NagZ Underlies a Dynamic Mechanism of Substrate Distortion., Bacik JP, Whitworth GE, Stubbs KA, Vocadlo DJ, Mark BL, Chem Biol. 2012 Nov 21;19(11):1471-82. doi: 10.1016/j.chembiol.2012.09.016. PMID:23177201

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk] Biological Unit Coordinates (4gvf.pdb1.gz) 63 Kb Biological Unit Coordinates (4gvf.pdb2.gz) 62 Kb LPC: Ligand-Protein Contacts for 4GVF CSU: Contacts of Structural Units for 4GVF Structure Factors (1656 Kb) Retrieve 4GVF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GVF from S2C, [Save to disk] Re-refined 4gvf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GVF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gvf] [4gvf_A] [4gvf_B] SWISS-PROT database:

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