OCA Atlas for 4L3O

4L3O

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACY, EDO, FAK, MES, NH2, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, C, A, B

Primary reference

Structural Basis for Potent Inhibition of SIRT2 Deacetylase by a Macrocyclic Peptide Inducing Dynamic Structural Change., Yamagata K, Goto Y, Nishimasu H, Morimoto J, Ishitani R, Dohmae N, Takeda N, Nagai R, Komuro I, Suga H, Nureki O, Structure. 2014 Feb 4;22(2):345-52. doi: 10.1016/j.str.2013.12.001. Epub 2014 Jan, 2. PMID:24389023

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]

Biological Unit Coordinates (4l3o.pdb1.gz) 57 Kb

Biological Unit Coordinates (4l3o.pdb2.gz) 56 Kb

Biological Unit Coordinates (4l3o.pdb3.gz) 56 Kb

Biological Unit Coordinates (4l3o.pdb4.gz) 55 Kb

LPC: Ligand-Protein Contacts for 4L3O

CSU: Contacts of Structural Units for 4L3O

Structure Factors (540 Kb)

Retrieve 4L3O in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4L3O from S2C, [Save to disk]

Re-refined 4l3o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4L3O in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4l3o] [4l3o_A] [4l3o_B] [4l3o_C] [4l3o_D] [4l3o_E] [4l3o_F] [4l3o_G] [4l3o_H]

SWISS-PROT database:

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