4LZL Transcription date Jul 31, 2013
title Structure Of The Inactive Form Of The Regulatory Domain From Repressor Of Iron Transport Regulator (Ritr)
authors N.R.Silvaggi, L.Han, A.T.Ulijasz
compound source
Molecule: Response Regulator
Chain: A
Fragment: N-Terminal Regulatory Domain
Engineered: Yes
Organism_scientific: Streptococcus Pneumoniae 2061617
Organism_taxid: 914130
Strain: G54
Gene: Amcsp02_000425, Ritr
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pe-Sumokan
symmetry Space Group: P 1
R_factor 0.141 R_Free 0.161
length a length b length c angle alpha angle beta angle gamma
28.460 33.840 34.960 92.65 103.71 97.53
method X-Ray Diffractionresolution 1.55 Å
ligand GOL enzyme
Gene AMCSP02

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (4lzl.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 4LZL
  • CSU: Contacts of Structural Units for 4LZL
  • Structure Factors (183 Kb)
  • Retrieve 4LZL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LZL from S2C, [Save to disk]
  • Re-refined 4lzl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LZL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LZL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4LZL, from MSDmotif at EBI
  • Fold representative 4lzl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lzl] [4lzl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4LZL: [REC ] by SMART
  • Other resources with information on 4LZL
  • Community annotation for 4LZL at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science