4MHL Protein Binding date Aug 29, 2013
title The Crystal Structure Of Human Interleukin-11
authors M.D.W.Griffin
compound source
Molecule: Interleukin-11
Chain: A
Fragment: Unp Residues 23-199
Synonym: Il-11, Adipogenesis Inhibitory Factor, Agif
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il11
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.184 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.862 28.169 41.806 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.09 Å
ligand ARF, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4mhl.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 4MHL
  • CSU: Contacts of Structural Units for 4MHL
  • Structure Factors (451 Kb)
  • Retrieve 4MHL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MHL from S2C, [Save to disk]
  • Re-refined 4mhl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MHL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MHL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4MHL, from MSDmotif at EBI
  • Fold representative 4mhl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mhl] [4mhl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4MHL
  • Community annotation for 4MHL at PDBWiki (http://pdbwiki.org)

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