4NLH Protein Binding date Nov 14, 2013
title Skich Domain Of Human Tax1bp1
authors Y.Yang, G.Wang, X.Huang, J.Zhu, Z.Du
compound source
Molecule: Tax1-Binding Protein 1
Chain: A, B
Synonym: Traf6-Binding Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Human Tax1bp1, Pro0105, T6bp, Tax1bp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.238 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.160 64.020 101.680 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (4nlh.pdb1.gz) 82 Kb
  • Biological Unit Coordinates (4nlh.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (4nlh.pdb3.gz) 41 Kb
  • CSU: Contacts of Structural Units for 4NLH
  • Structure Factors (160 Kb)
  • Retrieve 4NLH in mmCIF format [Save to disk]
  • Re-refined 4nlh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NLH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NLH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4NLH, from MSDmotif at EBI
  • Fold representative 4nlh from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nlh_A] [4nlh_B] [4nlh]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4NLH
  • Community annotation for 4NLH at PDBWiki (http://pdbwiki.org)

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