OCA Atlas for 4ORH

4ORH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, J, F
E, I, A

Primary reference

Molecular Insights into the Function of RING Finger (RNF)-containing Proteins hRNF8 and hRNF168 in Ubc13/Mms2-dependent Ubiquitylation., Campbell SJ, Edwards RA, Leung CC, Neculai D, Hodge CD, Dhe-Paganon S, Glover JN, J Biol Chem. 2012 Jul 6;287(28):23900-10. Epub 2012 May 15. PMID:22589545

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (507 Kb) [Save to disk]

Biological Unit Coordinates (4orh.pdb1.gz) 187 Kb

Biological Unit Coordinates (4orh.pdb2.gz) 185 Kb

Biological Unit Coordinates (4orh.pdb3.gz) 133 Kb

CSU: Contacts of Structural Units for 4ORH

Structure Factors (1023 Kb)

Retrieve 4ORH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4ORH from S2C, [Save to disk]

Re-refined 4orh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ORH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4orh] [4orh_A] [4orh_B] [4orh_C] [4orh_E] [4orh_F] [4orh_G] [4orh_H] [4orh_I] [4orh_J] [4orh_K] [4orh_L]

SWISS-PROT database:

Domains found in 4ORH: [RING] [UBCc ] by SMART

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