4PTU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, RAM enzyme
Primary referenceStructures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation., Bryson S, Thomson CA, Risnes LF, Dasgupta S, Smith K, Schrader JW, Pai EF, J Immunol. 2016 Jun 1;196(11):4723-30. doi: 10.4049/jimmunol.1402890. Epub 2016, Apr 29. PMID:27183571
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (4ptu.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 4PTU
  • CSU: Contacts of Structural Units for 4PTU
  • Structure Factors (1036 Kb)
  • Retrieve 4PTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PTU from S2C, [Save to disk]
  • Re-refined 4ptu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4PTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ptu] [4ptu_A] [4ptu_B]
  • SWISS-PROT database:
  • Domains found in 4PTU: [IG_like] [IGv ] by SMART

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