OCA Atlas for 4QN0

4QN0

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, B, C, A

Primary reference

Structural insights into apoptotic DNA degradation by CED-3 protease suppressor-6 (CPS-6) from Caenorhabditis elegans., Lin JL, Nakagawa A, Lin CL, Hsiao YY, Yang WZ, Wang YT, Doudeva LG, Skeen-Gaar RR, Xue D, Yuan HS, J Biol Chem. 2012 Mar 2;287(10):7110-20. Epub 2012 Jan 5. PMID:22223640

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]

Biological Unit Coordinates (4qn0.pdb1.gz) 80 Kb

Biological Unit Coordinates (4qn0.pdb2.gz) 80 Kb

Biological Unit Coordinates (4qn0.pdb3.gz) 42 Kb

Biological Unit Coordinates (4qn0.pdb4.gz) 42 Kb

Biological Unit Coordinates (4qn0.pdb5.gz) 42 Kb

Biological Unit Coordinates (4qn0.pdb6.gz) 42 Kb

LPC: Ligand-Protein Contacts for 4QN0

CSU: Contacts of Structural Units for 4QN0

Structure Factors (589 Kb)

Retrieve 4QN0 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4QN0 from S2C, [Save to disk]

Re-refined 4qn0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4QN0 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4qn0] [4qn0_A] [4qn0_B] [4qn0_C] [4qn0_D]

SWISS-PROT database:

Domains found in 4QN0: [Endonuclease_NS] [NUC ] by SMART

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