4QPP The Crystal Structure of Human HMT1 hnRNP methyltransferase-like protein 6 in complex with compound DS-421 (2-{4-[3-CHLORO-2-(2-METHOXYPHENYL)-1H-INDOL-5-YL]PIPERIDIN-1-YL}-N-METHYLETHANAMINE date
authors Dong, A., Zeng, H., Smil, D., Walker, J.R., He, H., Eram, M., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Vedadi, M., Brown, P.J., Wu, H., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2345
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.52
ligand 36S, SAH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • histone methyltransferase ac...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (4qpp.pdb1.gz) 110 Kb
  • Biological Unit Coordinates (4qpp.pdb2.gz) 109 Kb
  • Biological Unit Coordinates (4qpp.pdb3.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 4QPP
  • CSU: Contacts of Structural Units for 4QPP
  • Structure Factors (2086 Kb)
  • Retrieve 4QPP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QPP from S2C, [Save to disk]
  • Re-refined 4qpp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QPP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QPP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QPP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qpp_B] [4qpp_E] [4qpp_C] [4qpp_D] [4qpp_F] [4qpp_A] [4qpp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4QPP
  • Community annotation for 4QPP at PDBWiki (http://pdbwiki.org)

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