4QUM Crystal structure of PTPN3 (PTPH1) in complex with a dually phosphorylated MAPK12 peptide date
authors Chen, K.E., Meng, T.C., Wang, A.H.J.
compound source
symmetry
R_factor
R_Free 0.2448
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.52
ligand PTR, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceReciprocal allosteric regulation of p38gamma and PTPN3 involves a PDZ domain-modulated complex formation., Chen KE, Lin SY, Wu MJ, Ho MR, Santhanam A, Chou CC, Meng TC, Wang AH, Sci Signal. 2014 Oct 14;7(347):ra98. doi: 10.1126/scisignal.2005722. PMID:25314968
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (4qum.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 4QUM
  • CSU: Contacts of Structural Units for 4QUM
  • Structure Factors (387 Kb)
  • Retrieve 4QUM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QUM from S2C, [Save to disk]
  • Re-refined 4qum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QUM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QUM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QUM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qum] [4qum_A] [4qum_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QUM: [PTPc ] by SMART
  • Other resources with information on 4QUM
  • Community annotation for 4QUM at PDBWiki (http://pdbwiki.org)

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