4ROC Human TFIIB-related factor 2 (Brf2) and TBP bound to U6#2 promoter date
authors Vannini, A., Gouge, J., Satia, K., Guthertz, N.
compound source
symmetry
R_factor
R_Free 0.2152
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceRedox Signaling by the RNA Polymerase III TFIIB-Related Factor Brf2., Gouge J, Satia K, Guthertz N, Widya M, Thompson AJ, Cousin P, Dergai O, Hernandez N, Vannini A, Cell. 2015 Dec 3;163(6):1375-87. doi: 10.1016/j.cell.2015.11.005. PMID:26638071
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk]
  • Biological Unit Coordinates (4roc.pdb1.gz) 207 Kb
  • LPC: Ligand-Protein Contacts for 4ROC
  • CSU: Contacts of Structural Units for 4ROC
  • Structure Factors (1403 Kb)
  • Retrieve 4ROC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ROC from S2C, [Save to disk]
  • Re-refined 4roc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ROC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ROC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4roc_N] [4roc_A] [4roc_T] [4roc_B] [4roc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ROC: [CYCLIN ] by SMART
  • Other resources with information on 4ROC
  • Community annotation for 4ROC at PDBWiki (http://pdbwiki.org)

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