4WB9 Oxidoreductase date Sep 02, 2014
title Human Aldh1a1 Complexed With Nadh
authors C.A.Morgan, T.D.Hurley
compound source
Molecule: Retinal Dehydrogenase 1
Chain: A
Synonym: Raldh1,Aldh-E1,Alhdii,Aldehyde Dehydrogenase Famil A1,Aldehyde Dehydrogenase,Cytosolic;
Ec: 1.2.1.36
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aldh1a1, Aldc, Aldh1, Pumb1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 4 2 2
R_factor 0.174 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.415 109.415 83.448 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.07 Å
ligand CL, NAI, YB enzyme Oxidoreductase E.C.1.2.1.36 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • GTPase activator activity


  • Primary referenceDevelopment of a high-throughput in vitro assay to identify selective inhibitors for human ALDH1A1., Morgan CA, Hurley TD, Chem Biol Interact. 2014 Nov 4. pii: S0009-2797(14)00326-3. doi:, 10.1016/j.cbi.2014.10.028. PMID:25450233
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (4wb9.pdb1.gz) 652 Kb
  • LPC: Ligand-Protein Contacts for 4WB9
  • CSU: Contacts of Structural Units for 4WB9
  • Structure Factors (769 Kb)
  • Retrieve 4WB9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WB9 from S2C, [Save to disk]
  • Re-refined 4wb9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WB9 in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 4WB9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4WB9, from MSDmotif at EBI
  • Fold representative 4wb9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wb9_A] [4wb9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WB9
  • Community annotation for 4WB9 at PDBWiki (http://pdbwiki.org)

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