4ZDR Protein Binding date Apr 18, 2015
title Crystal Structure Of 14-3-3[Zeta]-Lkb1 Fusion Protein
authors S.Ding, Z.B.Shi
compound source
Molecule: 14-3-3 Protein Zetadelta,Ggsggs Linker,Serineth Protein Kinase Stk11;
Chain: A, B
Fragment: Unp Residues 1-230,Unp Residues 333-340
Synonym: Protein Kinase C Inhibitor Protein 1,Kcip-1,Liver Hlkb1,Renal Carcinoma Antigen Ny-Ren-19;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens, Synthetic Construct
Organism_common: Human
Organism_taxid: 9606, 32630
Gene: Ywhaz, Stk11, Lkb1, Pjs
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Codonplus
symmetry Space Group: H 3 2
R_factor 0.191 R_Free 0.245
length a length b length c angle alpha angle beta angle gamma
130.262 130.262 264.960 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand GOL, SO4, TME enzyme
A, B
  • positive regulation of prote...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (4zdr.pdb1.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 4ZDR
  • CSU: Contacts of Structural Units for 4ZDR
  • Structure Factors (291 Kb)
  • Retrieve 4ZDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZDR from S2C, [Save to disk]
  • Re-refined 4zdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZDR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4zdr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zdr] [4zdr_A] [4zdr_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZDR: [14_3_3 ] by SMART
  • Other resources with information on 4ZDR
  • Community annotation for 4ZDR at PDBWiki (http://pdbwiki.org)

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