4ZOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BGC, GOL, MG, PEG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFunctional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua., Nakajima M, Yoshida R, Miyanaga A, Abe K, Takahashi Y, Sugimoto N, Toyoizumi H, Nakai H, Kitaoka M, Taguchi H, PLoS One. 2016 Feb 17;11(2):e0148870. doi: 10.1371/journal.pone.0148870., eCollection 2016. PMID:26886583
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (475 Kb) [Save to disk]
  • Biological Unit Coordinates (4zod.pdb1.gz) 469 Kb
  • LPC: Ligand-Protein Contacts for 4ZOD
  • CSU: Contacts of Structural Units for 4ZOD
  • Structure Factors (1941 Kb)
  • Retrieve 4ZOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZOD from S2C, [Save to disk]
  • Re-refined 4zod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zod] [4zod_A] [4zod_B]
  • SWISS-PROT database:
  • Domain found in 4ZOD: [Fn3_like ] by SMART

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